Amycolatopsis pretoriensis strain DSM 44654

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis pretoriensis strain DSM 44654 is a notable bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may play a role in the organism's ecological interactions and its ability to colonize various environments. The strain is documented under the accession number FNUJ00000000.1, which indicates its genetic sequencing information is available for further study. In terms of genomic structure, A. pretoriensis DSM 44654 possesses a single replicon. This is indicative of a streamlined genomic organization, which can influence the bacterium's metabolic processes and adaptability to its surroundings. The presence of a single replicon is a feature commonly observed in many members of the Actinobacteria phylum, to which Amycolatopsis belongs. The combination of flagellar motility and a single replicon may provide insights into the ecological niche of A. pretoriensis DSM 44654, suggesting it could effectively navigate through diverse environments, enhancing its survival and competitive abilities. Such traits may allow it to thrive in soil or other habitats where it can contribute to the microbiome dynamics, facilitate nutrient cycling, or engage in interactions with other microorganisms. Understanding these characteristics can help elucidate the ecological roles of A. pretoriensis and its potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis pretoriensis
Strainstrain DSM 44654

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis pretoriensis strain DSM 44654 genome assembly,

Gene Summary

Adenine Count

1487983 bp

Thymine Count

1480820 bp

Guanine Count

3655551 bp

Cytosine Count

3674672 bp

Genome Length

10299026 bp

Protein-coding Genes

9764 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05421837_101534Not AvailablePositive540645 - 5407734788.29
bifunctional non-homologous end joining protein ligdSAMN05421837_101535Not AvailablePositive540791 - 54236858501.9
ribokinaseSAMN05421837_101536Not AvailableNegative542443 - 54337532020.1
antar domain-containing proteinSAMN05421837_101537Not AvailablePositive543683 - 54443226045.1
anti-anti-sigma factorSAMN05421837_101538Not AvailablePositive544503 - 54489813615.7
stage ii sporulation protein e (spoiie)SAMN05421837_101539Not AvailableNegative544906 - 54628849149.7
gaf domain-containing proteinSAMN05421837_101540Not AvailableNegative546296 - 54702725315.1
gaf domain-containing proteinSAMN05421837_101541Not AvailablePositive547126 - 54786626828.7
superfamily ii dna or rna helicase, snf2 familySAMN05421837_101542Not AvailablePositive547979 - 550987108549.0
uncharacterized conserved protein, contains zn finger domainSAMN05421837_101543Not AvailablePositive550980 - 55171125746.9

Displaying genes 591 – 600 of 9871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.