Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421837_101514 | Not Available | Negative | 519061 - 520074 | 39276.1 |
| regulatory protein, fis family | SAMN05421837_101515 | Not Available | Positive | 520238 - 521686 | 51677.6 |
| predicted arabinose efflux permease, mfs family | SAMN05421837_101516 | Not Available | Negative | 522073 - 523293 | 41384.4 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421837_101517 | Not Available | Positive | 523374 - 524777 | 50068.2 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421837_101518 | Not Available | Negative | 524705 - 526138 | 48626.4 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421837_101519 | Not Available | Negative | 526556 - 527026 | 17697.9 |
| hypothetical protein | SAMN05421837_101520 | Not Available | Positive | 527189 - 527704 | 18114.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101521 | Not Available | Positive | 527740 - 528681 | 34738.6 |
| dna-binding transcriptional regulator, marr family | SAMN05421837_101522 | Not Available | Positive | 528731 - 529168 | 15265.5 |
| major facilitator superfamily protein | SAMN05421837_101523 | Not Available | Positive | 529165 - 530556 | 47486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
