Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable f420-dependent oxidoreductase, msmeg_3544 family | SAMN05421837_101484 | Not Available | Positive | 485153 - 486034 | 31349.9 |
| dna helicase iv | SAMN05421837_101485 | Not Available | Positive | 486099 - 488057 | 69135.7 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421837_101486 | Not Available | Negative | 488054 - 489571 | 52215.6 |
| uncharacterized conserved protein, duf1015 family | SAMN05421837_101487 | Not Available | Positive | 489697 - 490857 | 39903.3 |
| hypothetical protein | SAMN05421837_101488 | Not Available | Negative | 490854 - 491777 | 34593.1 |
| protein of unknown function | SAMN05421837_101489 | Not Available | Negative | 491777 - 492235 | 17253.2 |
| atp-dependent dna ligase | SAMN05421837_101490 | Not Available | Positive | 492353 - 493417 | 39909.3 |
| dna ligase d | SAMN05421837_101491 | Not Available | Positive | 493414 - 494418 | 36916.0 |
| acetyltransferase (gnat) family protein | SAMN05421837_101492 | Not Available | Positive | 494420 - 494866 | 15987.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421837_101493 | Not Available | Negative | 494863 - 496005 | 37741.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
