Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421837_101474 | Not Available | Negative | 475231 - 475887 | 23671.1 |
| rhs repeat-associated core domain-containing protein | SAMN05421837_101475 | Not Available | Negative | 476051 - 479167 | 107617.0 |
| hypothetical protein | SAMN05421837_101476 | Not Available | Positive | 479478 - 479750 | 9784.18 |
| protein of unknown function | SAMN05421837_101477 | Not Available | Negative | 479754 - 481070 | 49072.2 |
| hypothetical protein | SAMN05421837_101478 | Not Available | Negative | 481067 - 481375 | 10616.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05421837_101479 | Not Available | Negative | 481556 - 482422 | 31068.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_101480 | Not Available | Positive | 482443 - 483258 | 29211.0 |
| trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthase | SAMN05421837_101481 | Not Available | Negative | 483268 - 484206 | 35555.1 |
| hypothetical protein | SAMN05421837_101482 | Not Available | Negative | 484223 - 484615 | 14858.0 |
| dna-binding transcriptional regulator, marr family | SAMN05421837_101483 | Not Available | Positive | 484680 - 485117 | 16236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
