Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101454 | Not Available | Positive | 460208 - 460855 | 23874.5 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN05421837_101455 | Not Available | Negative | 461052 - 461414 | 13181.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_101456 | Not Available | Negative | 461417 - 462163 | 25297.2 |
| predicted arabinose efflux permease, mfs family | SAMN05421837_101457 | Not Available | Positive | 462278 - 463480 | 40537.4 |
| 3-methyladenine dna glycosylase/8-oxoguanine dna glycosylase | SAMN05421837_101458 | Not Available | Negative | 463502 - 464401 | 33348.0 |
| uncharacterized peroxidase-related enzyme | SAMN05421837_101459 | Not Available | Positive | 464490 - 465056 | 19513.2 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05421837_101460 | Not Available | Positive | 465043 - 465867 | 28630.1 |
| nitroreductase / dihydropteridine reductase | SAMN05421837_101461 | Not Available | Positive | 465904 - 466551 | 24572.3 |
| nadph:quinone reductase | SAMN05421837_101462 | Not Available | Positive | 466601 - 467554 | 32326.3 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN05421837_101463 | Not Available | Positive | 467606 - 469228 | 59830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
