Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421837_101434 | Not Available | Positive | 443573 - 444760 | 43059.9 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN05421837_101435 | Not Available | Positive | 444757 - 445215 | 17212.2 |
| hypothetical protein | SAMN05421837_101436 | Not Available | Positive | 445289 - 445747 | 16650.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN05421837_101437 | Not Available | Negative | 445868 - 446776 | 33249.1 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421837_101438 | Not Available | Positive | 446869 - 448221 | 44980.4 |
| 4-carboxymuconolactone decarboxylase | SAMN05421837_101439 | Not Available | Positive | 448248 - 448568 | 11605.9 |
| protein of unknown function | SAMN05421837_101440 | Not Available | Positive | 448697 - 449413 | 25542.4 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421837_101441 | Not Available | Negative | 449427 - 450263 | 29113.7 |
| helix-turn-helix domain-containing protein | SAMN05421837_101442 | Not Available | Positive | 450376 - 451209 | 30546.5 |
| flavin containing amine oxidoreductase | SAMN05421837_101443 | Not Available | Negative | 451239 - 452330 | 39380.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
