Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | SAMN05421837_101424 | Not Available | Positive | 434499 - 435041 | 19149.0 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421837_101425 | Not Available | Negative | 435112 - 436353 | 43448.2 |
| hypothetical protein | SAMN05421837_101426 | Not Available | Positive | 437043 - 437483 | 15514.5 |
| chloride channel protein, cic family | SAMN05421837_101427 | Not Available | Positive | 437810 - 439585 | 61177.0 |
| dna-binding transcriptional regulator, marr family | SAMN05421837_101428 | Not Available | Negative | 439636 - 440130 | 17588.2 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421837_101429 | Not Available | Negative | 440282 - 440980 | 25714.0 |
| hypothetical protein | SAMN05421837_101430 | Not Available | Negative | 440977 - 441192 | 7908.43 |
| hypothetical protein | SAMN05421837_101431 | Not Available | Negative | 441197 - 441397 | 6742.11 |
| signal transduction histidine kinase | SAMN05421837_101432 | Not Available | Negative | 441394 - 442755 | 49003.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421837_101433 | Not Available | Negative | 442752 - 443432 | 24784.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
