Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN05421837_101376 | Not Available | Negative | 382974 - 384257 | 45106.7 |
| polysaccharide deacetylase | SAMN05421837_101377 | Not Available | Negative | 384254 - 385141 | 33010.9 |
| dna-binding transcriptional regulator, lrp family | SAMN05421837_101378 | Not Available | Negative | 385138 - 386145 | 36191.1 |
| sugar or nucleoside kinase, ribokinase family | SAMN05421837_101379 | Not Available | Negative | 386662 - 387603 | 31168.4 |
| l-fuculose-phosphate aldolase | SAMN05421837_101380 | Not Available | Negative | 387600 - 388271 | 22702.1 |
| dna-binding transcriptional regulator, acrr family | SAMN05421837_101381 | Not Available | Positive | 388325 - 388921 | 21400.7 |
| thymidylate synthase | SAMN05421837_101382 | Not Available | Positive | 388932 - 389729 | 30080.5 |
| dihydrofolate reductase | SAMN05421837_101383 | Not Available | Positive | 389726 - 390184 | 16570.6 |
| hypothetical protein | SAMN05421837_101384 | Not Available | Positive | 390186 - 390686 | 17742.3 |
| ricin-type beta-trefoil lectin domain-containing protein | SAMN05421837_101385 | Not Available | Positive | 390798 - 392657 | 64200.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
