Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, acrr family | SAMN05421837_101336 | Not Available | Negative | 345395 - 346051 | 23426.0 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05421837_101337 | Not Available | Positive | 346121 - 347293 | 42764.7 |
| nad(p)h dehydrogenase (quinone) | SAMN05421837_101338 | Not Available | Negative | 347283 - 348137 | 29085.4 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421837_101339 | Not Available | Positive | 348257 - 348652 | 14635.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_101340 | Not Available | Positive | 348738 - 349505 | 26048.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_101341 | Not Available | Positive | 349502 - 350380 | 30382.0 |
| enoyl-coa hydratase | SAMN05421837_101342 | Not Available | Positive | 350380 - 351120 | 26376.5 |
| acyl coa:acetate/3-ketoacid coa transferase, alpha subunit | SAMN05421837_101343 | Not Available | Positive | 351110 - 351973 | 31197.0 |
| acyl coa:acetate/3-ketoacid coa transferase, beta subunit | SAMN05421837_101344 | Not Available | Positive | 351970 - 352701 | 26387.4 |
| nad(p)h-dependent flavin oxidoreductase yrpb, nitropropane dioxygenase family | SAMN05421837_101345 | Not Available | Positive | 352698 - 353753 | 36517.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
