Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN05421837_101326 | Not Available | Negative | 326600 - 327631 | 36895.0 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05421837_101327 | Not Available | Negative | 327692 - 328927 | 45599.6 |
| putative drug exporter of the rnd superfamily | SAMN05421837_101328 | Not Available | Positive | 329185 - 331179 | 68142.8 |
| predicted arabinose efflux permease, mfs family | SAMN05421837_101329 | Not Available | Positive | 331176 - 332573 | 46457.8 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421837_101330 | Not Available | Positive | 332666 - 334393 | 59465.6 |
| phthiocerol/phenolphthiocerol synthesis type-i polyketide synthase d | SAMN05421837_101331 | Not Available | Positive | 334390 - 340809 | 225118.0 |
| propionyl-coa carboxylase beta chain | SAMN05421837_101332 | Not Available | Positive | 340809 - 342386 | 56667.6 |
| s-formylglutathione hydrolase frmb | SAMN05421837_101333 | Not Available | Positive | 342397 - 343365 | 34799.6 |
| secretory lipase | SAMN05421837_101334 | Not Available | Positive | 343396 - 344610 | 42159.9 |
| cutinase | SAMN05421837_101335 | Not Available | Negative | 344614 - 345264 | 21874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
