Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like polyketide cyclase | SAMN05421837_101316 | Not Available | Positive | 315426 - 315986 | 20972.0 |
| inner membrane transporter rhta | SAMN05421837_101317 | Not Available | Negative | 315841 - 316809 | 32046.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05421837_101318 | Not Available | Positive | 316878 - 317729 | 31579.6 |
| protein of unknown function | SAMN05421837_101319 | Not Available | Negative | 317717 - 318367 | 22548.2 |
| zinc carboxypeptidase | SAMN05421837_101320 | Not Available | Positive | 318554 - 321037 | 88112.7 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421837_101321 | Not Available | Negative | 321084 - 321689 | 20225.2 |
| dnaj domain-containing protein | SAMN05421837_101322 | Not Available | Negative | 321686 - 322780 | 39576.4 |
| 2-aminobenzoate-coa ligase | SAMN05421837_101323 | Not Available | Negative | 323102 - 324694 | 56784.2 |
| f420-dependent oxidoreductase, g6pdh family | SAMN05421837_101324 | Not Available | Positive | 324885 - 325835 | 34820.1 |
| polar amino acid transport system substrate-binding protein | SAMN05421837_101325 | Not Available | Negative | 325837 - 326550 | 24588.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
