Amycolatopsis pretoriensis strain DSM 44654

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis pretoriensis strain DSM 44654 is a notable bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may play a role in the organism's ecological interactions and its ability to colonize various environments. The strain is documented under the accession number FNUJ00000000.1, which indicates its genetic sequencing information is available for further study. In terms of genomic structure, A. pretoriensis DSM 44654 possesses a single replicon. This is indicative of a streamlined genomic organization, which can influence the bacterium's metabolic processes and adaptability to its surroundings. The presence of a single replicon is a feature commonly observed in many members of the Actinobacteria phylum, to which Amycolatopsis belongs. The combination of flagellar motility and a single replicon may provide insights into the ecological niche of A. pretoriensis DSM 44654, suggesting it could effectively navigate through diverse environments, enhancing its survival and competitive abilities. Such traits may allow it to thrive in soil or other habitats where it can contribute to the microbiome dynamics, facilitate nutrient cycling, or engage in interactions with other microorganisms. Understanding these characteristics can help elucidate the ecological roles of A. pretoriensis and its potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis pretoriensis
Strainstrain DSM 44654

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis pretoriensis strain DSM 44654 genome assembly,

Gene Summary

Adenine Count

1487983 bp

Thymine Count

1480820 bp

Guanine Count

3655551 bp

Cytosine Count

3674672 bp

Genome Length

10299026 bp

Protein-coding Genes

9764 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
osmoprotectant transport system substrate-binding proteinSAMN05421837_101286Not AvailablePositive284909 - 28582632113.3
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN05421837_101287Not AvailableNegative285842 - 28664528191.6
dna-binding transcriptional regulator, acrr familySAMN05421837_101288Not AvailablePositive286763 - 28736221552.7
dna-binding transcriptional regulator, acrr familySAMN05421837_101289Not AvailableNegative287355 - 28793921502.8
drug resistance transporter, emrb/qaca subfamilySAMN05421837_101290Not AvailablePositive288021 - 28958954189.5
nucleotide-binding universal stress protein, uspa familySAMN05421837_101291Not AvailablePositive289601 - 29008016925.5
hypothetical proteinSAMN05421837_101292Not AvailablePositive290139 - 29053714151.1
hypothetical proteinSAMN05421837_101293Not AvailableNegative290525 - 29131326828.4
helix-turn-helix domain-containing proteinSAMN05421837_101294Not AvailableNegative291310 - 29216131027.3
salicylate hydroxylaseSAMN05421837_101295Not AvailablePositive292234 - 29338841178.9

Displaying genes 341 – 350 of 9871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.