Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase (phyh) | SAMN05421837_101256 | Not Available | Positive | 257549 - 258388 | 30616.1 |
| hypothetical protein | SAMN05421837_101257 | Not Available | Positive | 258429 - 258569 | 4727.01 |
| hypothetical protein | SAMN05421837_101258 | Not Available | Negative | 258573 - 259007 | 16034.8 |
| dna ligase (nad+) | SAMN05421837_101259 | Not Available | Negative | 259024 - 261039 | 71820.6 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | SAMN05421837_101260 | Not Available | Negative | 261052 - 261945 | 31407.9 |
| sialidase-1 | SAMN05421837_101261 | Not Available | Negative | 261951 - 263150 | 41798.8 |
| hypothetical protein | SAMN05421837_101262 | Not Available | Negative | 263568 - 264014 | 16295.4 |
| methyltransferase, fkbm family | SAMN05421837_101263 | Not Available | Positive | 264025 - 264894 | 32318.7 |
| probable f420-dependent oxidoreductase, rv2161c family | SAMN05421837_101264 | Not Available | Positive | 264936 - 265793 | 30463.5 |
| f5/8 type c domain-containing protein | SAMN05421837_101265 | Not Available | Positive | 265913 - 269596 | 127187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
