Amycolatopsis pretoriensis strain DSM 44654

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis pretoriensis strain DSM 44654 is a notable bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may play a role in the organism's ecological interactions and its ability to colonize various environments. The strain is documented under the accession number FNUJ00000000.1, which indicates its genetic sequencing information is available for further study. In terms of genomic structure, A. pretoriensis DSM 44654 possesses a single replicon. This is indicative of a streamlined genomic organization, which can influence the bacterium's metabolic processes and adaptability to its surroundings. The presence of a single replicon is a feature commonly observed in many members of the Actinobacteria phylum, to which Amycolatopsis belongs. The combination of flagellar motility and a single replicon may provide insights into the ecological niche of A. pretoriensis DSM 44654, suggesting it could effectively navigate through diverse environments, enhancing its survival and competitive abilities. Such traits may allow it to thrive in soil or other habitats where it can contribute to the microbiome dynamics, facilitate nutrient cycling, or engage in interactions with other microorganisms. Understanding these characteristics can help elucidate the ecological roles of A. pretoriensis and its potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis pretoriensis
Strainstrain DSM 44654

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis pretoriensis strain DSM 44654 genome assembly,

Gene Summary

Adenine Count

1487983 bp

Thymine Count

1480820 bp

Guanine Count

3655551 bp

Cytosine Count

3674672 bp

Genome Length

10299026 bp

Protein-coding Genes

9764 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysophospholipase l1SAMN05421837_101246Not AvailableNegative245931 - 24653620284.2
hypothetical proteinSAMN05421837_101247Not AvailablePositive246585 - 24739728420.7
regulatory protein, luxr familySAMN05421837_101248Not AvailableNegative247394 - 25010295366.5
imidazolonepropionaseSAMN05421837_101249Not AvailablePositive250344 - 25154041072.4
alpha/beta hydrolase foldSAMN05421837_101250Not AvailableNegative251794 - 25345858305.3
uncharacterized membrane protein yckc, rdd familySAMN05421837_101251Not AvailablePositive253610 - 25417921254.5
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN05421837_101252Not AvailableNegative254060 - 25470422947.8
histidine kinaseSAMN05421837_101253Not AvailableNegative254728 - 25589740113.8
hypothetical proteinSAMN05421837_101254Not AvailablePositive256032 - 25648117034.2
dna-binding transcriptional regulator, laci/purr familySAMN05421837_101255Not AvailableNegative256465 - 25746635624.6

Displaying genes 301 – 310 of 9871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.