Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05421837_101206 | Not Available | Positive | 215776 - 216765 | 35492.8 |
| pep-cterm protein-sorting domain-containing protein | SAMN05421837_101207 | Not Available | Negative | 216718 - 217149 | 14241.8 |
| dna-binding transcriptional regulator, marr family | SAMN05421837_101208 | Not Available | Positive | 217233 - 217718 | 17576.4 |
| dna-binding transcriptional regulator, marr family | SAMN05421837_101209 | Not Available | Positive | 217761 - 218219 | 16823.5 |
| hypothetical protein | SAMN05421837_101210 | Not Available | Positive | 218315 - 219622 | 45356.3 |
| pap2 superfamily protein | SAMN05421837_101211 | Not Available | Negative | 219626 - 220897 | 44121.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101212 | Not Available | Positive | 221012 - 221587 | 21461.7 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421837_101213 | Not Available | Positive | 221584 - 222261 | 23471.1 |
| plastocyanin | SAMN05421837_101214 | Not Available | Positive | 222282 - 222698 | 14068.8 |
| calcineurin-like phosphoesterase | SAMN05421837_101215 | Not Available | Positive | 222695 - 223633 | 33254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
