Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | SAMN05421837_101186 | Not Available | Positive | 196535 - 197725 | 40604.4 |
| meds: methanogen/methylotroph, dcmr sensory domain | SAMN05421837_101187 | Not Available | Positive | 197815 - 198648 | 29363.1 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN05421837_101188 | Not Available | Positive | 198645 - 199610 | 34707.3 |
| antar domain-containing protein | SAMN05421837_101189 | Not Available | Negative | 199613 - 200698 | 37594.0 |
| lipoprotein signal peptidase | SAMN05421837_101190 | Not Available | Negative | 200768 - 201445 | 23600.8 |
| acetyltransferase (gnat) family protein | SAMN05421837_101191 | Not Available | Negative | 201557 - 202504 | 34088.9 |
| hypothetical protein | SAMN05421837_101192 | Not Available | Negative | 202556 - 203014 | 16434.1 |
| dna-binding transcriptional regulator, acrr family | SAMN05421837_101193 | Not Available | Positive | 203104 - 203826 | 25989.8 |
| protein of unknown function | SAMN05421837_101194 | Not Available | Positive | 203841 - 204737 | 32149.0 |
| coth protein | SAMN05421837_101195 | Not Available | Negative | 204734 - 206374 | 59695.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
