Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101176 | Not Available | Negative | 188823 - 189761 | 33775.3 |
| serine/threonine protein phosphatase prpc | SAMN05421837_101177 | Not Available | Negative | 189847 - 190572 | 25582.4 |
| hypothetical protein | SAMN05421837_101178 | Not Available | Positive | 190931 - 191299 | 12579.3 |
| hypothetical protein | SAMN05421837_101179 | Not Available | Positive | 191333 - 191704 | 13610.6 |
| hypothetical protein | SAMN05421837_101180 | Not Available | Positive | 191724 - 192392 | 24559.8 |
| protein of unknown function | SAMN05421837_101181 | Not Available | Positive | 192415 - 192870 | 16378.5 |
| hypothetical protein | SAMN05421837_101182 | Not Available | Negative | 192867 - 193436 | 19843.9 |
| uncharacterized membrane protein | SAMN05421837_101183 | Not Available | Negative | 193870 - 194457 | 20204.4 |
| anti-anti-sigma factor | SAMN05421837_101184 | Not Available | Negative | 194486 - 194893 | 14334.0 |
| hypothetical protein | SAMN05421837_101185 | Not Available | Negative | 194969 - 196408 | 51417.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
