Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoquinoline 1-oxidoreductase, beta subunit | SAMN05421837_101166 | Not Available | Positive | 179408 - 181687 | 80171.3 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN05421837_101167 | Not Available | Positive | 181697 - 182173 | 17248.8 |
| sulfate permease, sulp family | SAMN05421837_101168 | Not Available | Positive | 182290 - 183774 | 50900.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05421837_101169 | Not Available | Negative | 183758 - 184690 | 32739.3 |
| probable blue pigment (indigoidine) exporter | SAMN05421837_101170 | Not Available | Positive | 184730 - 185638 | 30453.2 |
| hypothetical protein | SAMN05421837_101171 | Not Available | Positive | 185635 - 185835 | 6733.47 |
| hypothetical protein | SAMN05421837_101172 | Not Available | Positive | 186030 - 186659 | 21179.3 |
| hypothetical protein | SAMN05421837_101173 | Not Available | Negative | 186643 - 187086 | 14825.4 |
| dihydrofolate reductase | SAMN05421837_101174 | Not Available | Negative | 187168 - 187734 | 20423.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101175 | Not Available | Positive | 187838 - 188818 | 35278.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
