Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | SAMN05421837_101156 | Not Available | Negative | 164370 - 168995 | 166446.0 |
| helix-turn-helix domain-containing protein | SAMN05421837_101157 | Not Available | Positive | 169282 - 169860 | 22004.1 |
| hypothetical protein | SAMN05421837_101158 | Not Available | Positive | 169871 - 170053 | 6956.45 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421837_101159 | Not Available | Negative | 170017 - 171039 | 37081.8 |
| dna-binding transcriptional regulator, acrr family | SAMN05421837_101160 | Not Available | Positive | 171077 - 171637 | 20201.9 |
| rna polymerase sigma-b factor | SAMN05421837_101161 | Not Available | Negative | 171669 - 172481 | 29870.6 |
| hypothetical protein | SAMN05421837_101162 | Not Available | Negative | 172558 - 173529 | 33595.0 |
| mannan endo-1,4-beta-mannosidase | SAMN05421837_101163 | Not Available | Positive | 173834 - 176104 | 77750.5 |
| hypothetical protein | SAMN05421837_101164 | Not Available | Positive | 176132 - 177946 | 64544.2 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05421837_101165 | Not Available | Positive | 178009 - 179220 | 43058.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
