Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein | SAMN05421837_101117 | Not Available | Positive | 114215 - 116254 | 70351.8 |
| phage tail protein, p2 protein i family | SAMN05421837_101118 | Not Available | Positive | 116251 - 118167 | 67970.6 |
| phage tail protein domain-containing protein | SAMN05421837_1011200 | Not Available | Negative | 1264434 - 1264973 | 19178.0 |
| Baseplate assembly protein | SAMN05421837_1011201 | Not Available | Negative | 1264970 - 1266931 | 70758.1 |
| Base plate wedge subunit | SAMN05421837_1011202 | Not Available | Negative | 1266931 - 1267341 | 14929.8 |
| Baseplate puncturing device | SAMN05421837_1011203 | Not Available | Negative | 1267343 - 1267624 | 8845.05 |
| Tail protein | SAMN05421837_1011204 | Not Available | Negative | 1267637 - 1269460 | 63996.6 |
| lysm domain-containing protein | SAMN05421837_1011205 | Not Available | Negative | 1269453 - 1270214 | 27092.1 |
| conserved hypothetical phage tail region protein | SAMN05421837_1011206 | Not Available | Negative | 1270220 - 1270666 | 16020.1 |
| Hypothetical protein | SAMN05421837_107322 | Not Available | Positive | 6544892 - 6545209 | 11530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
