Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05421837_10194 | Not Available | Negative | 93958 - 94923 | 34901.2 |
| hypothetical protein | SAMN05421837_10195 | Not Available | Positive | 95047 - 95616 | 20504.4 |
| ferredoxin-nadp reductase | SAMN05421837_10196 | Not Available | Negative | 95619 - 97295 | 60153.5 |
| putative stress-induced transcription regulator | SAMN05421837_10197 | Not Available | Negative | 97307 - 97807 | 18020.1 |
| uncharacterized conserved protein, duf427 family | SAMN05421837_10198 | Not Available | Positive | 97892 - 98761 | 32761.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_10199 | Not Available | Positive | 98763 - 99476 | 23873.5 |
| catechol 2,3-dioxygenase | SAMN05421837_101100 | Not Available | Positive | 99460 - 99900 | 15762.4 |
| glycosyl hydrolase catalytic core | SAMN05421837_101101 | Not Available | Negative | 99885 - 100673 | 28057.2 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421837_101102 | Not Available | Negative | 100778 - 101758 | 36337.1 |
| dna-binding transcriptional activator of the sarp family | SAMN05421837_101103 | Not Available | Negative | 102004 - 102729 | 26954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
