Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | SAMN05421837_10184 | Not Available | Positive | 86310 - 87014 | 24818.7 |
| 4-oxalomesaconate tautomerase | SAMN05421837_10185 | Not Available | Positive | 87011 - 88030 | 35191.1 |
| catechol 2,3-dioxygenase | SAMN05421837_10186 | Not Available | Positive | 88041 - 88997 | 35695.6 |
| hypothetical protein | SAMN05421837_10187 | Not Available | Negative | 88903 - 90009 | 39438.6 |
| hypothetical protein | SAMN05421837_10188 | Not Available | Negative | 90057 - 90563 | 18552.2 |
| hypothetical protein | SAMN05421837_10189 | Not Available | Negative | 90560 - 90997 | 15952.8 |
| dna-binding transcriptional regulator, marr family | SAMN05421837_10190 | Not Available | Positive | 91417 - 91893 | 17192.8 |
| nitroreductase | SAMN05421837_10191 | Not Available | Positive | 91995 - 92663 | 24557.3 |
| hypothetical protein | SAMN05421837_10192 | Not Available | Positive | 92707 - 92955 | 8556.28 |
| hypothetical protein | SAMN05421837_10193 | Not Available | Positive | 93120 - 93968 | 29970.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
