Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421837_10174 | Not Available | Positive | 76571 - 77395 | 29474.1 |
| hypothetical protein | SAMN05421837_10175 | Not Available | Negative | 77392 - 77766 | 13057.6 |
| protein-tyrosine-phosphatase | SAMN05421837_10176 | Not Available | Negative | 77763 - 78482 | 26341.4 |
| mfs transporter, putative metabolite:h+ symporter | SAMN05421837_10177 | Not Available | Negative | 78554 - 79909 | 49246.4 |
| 2-pyrone-4,6-dicarboxylate lactonase | SAMN05421837_10178 | Not Available | Negative | 79930 - 80838 | 33971.3 |
| 4-oxalmesaconate hydratase | SAMN05421837_10179 | Not Available | Negative | 80835 - 81860 | 37860.8 |
| hypothetical protein | SAMN05421837_10180 | Not Available | Positive | 82062 - 83240 | 38864.9 |
| mfs transporter, aahs family, benzoate transport protein | SAMN05421837_10181 | Not Available | Negative | 83206 - 84525 | 45556.8 |
| nad binding domain of 6-phosphogluconate dehydrogenase | SAMN05421837_10182 | Not Available | Negative | 84611 - 85387 | 25586.5 |
| dna-binding transcriptional regulator, gntr family | SAMN05421837_10183 | Not Available | Positive | 85481 - 86158 | 24460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
