Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421837_10164 | Not Available | Positive | 65080 - 65463 | 13130.1 |
| hypothetical protein | SAMN05421837_10165 | Not Available | Negative | 65373 - 67763 | 79284.7 |
| gntr family transcriptional regulator | SAMN05421837_10166 | Not Available | Negative | 68055 - 68753 | 25348.4 |
| hexosaminidase | SAMN05421837_10167 | Not Available | Negative | 68849 - 70372 | 55656.7 |
| n,n'-diacetylchitobiose transport system permease protein | SAMN05421837_10168 | Not Available | Negative | 70372 - 71190 | 29602.2 |
| n,n'-diacetylchitobiose transport system permease protein | SAMN05421837_10169 | Not Available | Negative | 71187 - 72128 | 34069.9 |
| n,n'-diacetylchitobiose transport system substrate-binding protein | SAMN05421837_10170 | Not Available | Negative | 72201 - 73481 | 44601.2 |
| carbohydrate binding domain-containing protein | SAMN05421837_10171 | Not Available | Negative | 73581 - 74753 | 41881.4 |
| uncharacterized conserved protein | SAMN05421837_10172 | Not Available | Positive | 74975 - 75346 | 13266.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_10173 | Not Available | Positive | 75339 - 76571 | 44558.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
