Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | SAMN05421837_10144 | Not Available | Negative | 40123 - 41010 | 31051.9 |
| acetoacetyl-coa synthetase | SAMN05421837_10145 | Not Available | Negative | 41007 - 42884 | 67002.0 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421837_10146 | Not Available | Negative | 42881 - 43657 | 27303.1 |
| fatty-acyl-coa synthase | SAMN05421837_10147 | Not Available | Negative | 43654 - 45210 | 55252.9 |
| anti-anti-sigma factor | SAMN05421837_10148 | Not Available | Positive | 45509 - 45925 | 14899.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421837_10149 | Not Available | Negative | 46083 - 47030 | 32585.7 |
| regulatory protein, tetr family | SAMN05421837_10150 | Not Available | Positive | 47171 - 47806 | 22933.5 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN05421837_10151 | Not Available | Negative | 47814 - 48743 | 32821.8 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN05421837_10152 | Not Available | Negative | 48814 - 50532 | 62772.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421837_10153 | Not Available | Negative | 50529 - 51533 | 35888.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
