Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421837_10134 | Not Available | Positive | 33634 - 34107 | 16958.1 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05421837_10135 | Not Available | Positive | 34164 - 34781 | 22811.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05421837_10136 | Not Available | Negative | 34774 - 35325 | 19133.7 |
| hypothetical protein | SAMN05421837_10137 | Not Available | Positive | 35517 - 35639 | 4504.9 |
| hypothetical protein | SAMN05421837_10138 | Not Available | Positive | 35648 - 36277 | 21922.0 |
| protein of unknown function | SAMN05421837_10139 | Not Available | Negative | 36299 - 36754 | 15629.4 |
| mn-containing catalase | SAMN05421837_10140 | Not Available | Negative | 36982 - 37998 | 36432.1 |
| hypothetical protein | SAMN05421837_10141 | Not Available | Positive | 38120 - 38845 | 26513.2 |
| hypothetical protein | SAMN05421837_10142 | Not Available | Negative | 38954 - 39175 | 8297.76 |
| hypothetical protein | SAMN05421837_10143 | Not Available | Negative | 39241 - 40107 | 31315.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
