Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05421837_101963 | Not Available | Positive | 999830 - 1004380 | 160940.0 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05421837_101964 | Not Available | Positive | 1004385 - 1006763 | 84643.0 |
| ca2+:h+ antiporter | SAMN05421837_101965 | Not Available | Negative | 1006860 - 1007954 | 37087.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05421837_101966 | Not Available | Negative | 1008006 - 1008899 | 32479.1 |
| pyruvate dehydrogenase (quinone) | SAMN05421837_101967 | Not Available | Positive | 1008979 - 1010703 | 61046.6 |
| hypothetical protein | SAMN05421837_101968 | Not Available | Negative | 1010700 - 1010957 | 9015.84 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05421837_101969 | Not Available | Negative | 1010961 - 1012070 | 38926.6 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN05421837_101970 | Not Available | Negative | 1012158 - 1013774 | 58123.7 |
| hypothetical protein | SAMN05421837_101971 | Not Available | Negative | 1013876 - 1014700 | 30772.3 |
| hypothetical protein | SAMN05421837_101972 | Not Available | Positive | 1014845 - 1015879 | 35819.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
