Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, acrr family | SAMN05421837_101943 | Not Available | Negative | 977745 - 978332 | 22228.9 |
| hypothetical protein | SAMN05421837_101944 | Not Available | Negative | 978398 - 980002 | 56224.1 |
| molybdenum cofactor biosynthesis protein f | SAMN05421837_101945 | Not Available | Negative | 980006 - 980740 | 27077.6 |
| primary-amine oxidase | SAMN05421837_101946 | Not Available | Negative | 980747 - 982606 | 68174.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_101947 | Not Available | Positive | 982721 - 983761 | 34177.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_101948 | Not Available | Positive | 983775 - 984575 | 27233.4 |
| branched-chain amino acid transport system atp-binding protein | SAMN05421837_101949 | Not Available | Negative | 984577 - 985269 | 24065.4 |
| branched-chain amino acid transport system permease protein | SAMN05421837_101950 | Not Available | Negative | 985266 - 986975 | 59491.2 |
| hypothetical protein | SAMN05421837_101951 | Not Available | Negative | 987349 - 987525 | 6056.35 |
| branched-chain amino acid transport system permease protein | SAMN05421837_101952 | Not Available | Negative | 987512 - 988372 | 29505.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
