Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-[acyl-carrier protein] reductase ii | SAMN05421837_10124 | Not Available | Negative | 23425 - 24381 | 32345.0 |
| fatty-acyl-coa synthase | SAMN05421837_10125 | Not Available | Negative | 24378 - 25958 | 56246.5 |
| enoyl-coa hydratase/methylglutaconyl-coa hydratase | SAMN05421837_10126 | Not Available | Negative | 25955 - 26707 | 26304.5 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421837_10127 | Not Available | Negative | 26704 - 27888 | 41344.4 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421837_10128 | Not Available | Negative | 27885 - 28604 | 24956.4 |
| hydroxymethylglutaryl-coa lyase | SAMN05421837_10129 | Not Available | Negative | 28601 - 29530 | 32344.3 |
| dna-binding transcriptional regulator, marr family | SAMN05421837_10130 | Not Available | Negative | 29583 - 30083 | 17944.4 |
| nitrate/nitrite transporter nark | SAMN05421837_10131 | Not Available | Positive | 30175 - 31503 | 46798.1 |
| hypothetical protein | SAMN05421837_10132 | Not Available | Negative | 31500 - 32285 | 29759.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_10133 | Not Available | Negative | 32613 - 33491 | 31703.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
