Pseudomonas deceptionensis strain LMG 25555

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas deceptionensis strain LMG 25555 is characterized by having a single replicon, which is a notable trait for its genetic organization. The strain is cataloged under the accession number FNUD00000000.1, indicating its quality and availability in genomic databases for further research and analysis. As a member of the Pseudomonas genus, which is well-known for its metabolic versatility, Pseudomonas deceptionensis may possess various ecological roles and capabilities. Members of this genus are often found in diverse environments, including soil, water, and plant surfaces, where they contribute to nutrient cycling and can interact with other microorganisms. The single replicon characteristic suggests a streamlined genetic architecture, which could influence the strain's adaptability and survival in its ecological niche. This could allow for efficient regulation of gene expression and replication processes, potentially enhancing its ability to respond to environmental stresses or changes. Overall, Pseudomonas deceptionensis strain LMG 25555 may play a significant role in its ecosystem, leveraging its genetic traits for survival and interaction within microbial communities. Further studies on this strain could provide deeper insights into its ecological functions and potential applications in biotechnology or bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas deceptionensis
Strainstrain LMG 25555

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas deceptionensis strain LMG 25555
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas deceptionensis strain LMG 25555 genome assembly,

Gene Summary

Adenine Count

1056969 bp

Thymine Count

1057694 bp

Guanine Count

1491757 bp

Cytosine Count

1490342 bp

Genome Length

5096762 bp

Protein-coding Genes

4530 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-lactate dehydrogenaseSAMN04489800_0148Not AvailablePositive157710 - 160520102019.0
hypothetical proteinSAMN04489800_0149Not AvailablePositive160808 - 1610899789.61
Tmrna,resume consensus sequence (at 90): tatagttgccaatgacgaNot AvailableNot AvailablePositive161161 - 161552Not Available
nadh dehydrogenaseSAMN04489800_0151Not AvailableNegative161654 - 16285642790.1
rrf2 family proteinSAMN04489800_0152Not AvailablePositive163157 - 16372020390.5
o-acetylserine/cysteine efflux transporterSAMN04489800_0153Not AvailableNegative163641 - 16457633981.7
arac-type dna-binding proteinSAMN04489800_0154Not AvailablePositive164696 - 16547828985.1
putrescine transport system permease proteinSAMN04489800_0155Not AvailableNegative165651 - 16653532157.2
putrescine transport system permease proteinSAMN04489800_0156Not AvailableNegative166532 - 16745234427.5
putrescine transport system atp-binding proteinSAMN04489800_0157Not AvailableNegative167449 - 16859142500.3

Displaying genes 251 – 260 of 4704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm00347382-oxobutanoic acidC4H5O3Chemical structure of 2-oxobutanoic acidNULL
Average101.0807Da
Monoisotopic101.023869026Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.