Pseudomonas deceptionensis strain LMG 25555

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas deceptionensis strain LMG 25555 is characterized by having a single replicon, which is a notable trait for its genetic organization. The strain is cataloged under the accession number FNUD00000000.1, indicating its quality and availability in genomic databases for further research and analysis. As a member of the Pseudomonas genus, which is well-known for its metabolic versatility, Pseudomonas deceptionensis may possess various ecological roles and capabilities. Members of this genus are often found in diverse environments, including soil, water, and plant surfaces, where they contribute to nutrient cycling and can interact with other microorganisms. The single replicon characteristic suggests a streamlined genetic architecture, which could influence the strain's adaptability and survival in its ecological niche. This could allow for efficient regulation of gene expression and replication processes, potentially enhancing its ability to respond to environmental stresses or changes. Overall, Pseudomonas deceptionensis strain LMG 25555 may play a significant role in its ecosystem, leveraging its genetic traits for survival and interaction within microbial communities. Further studies on this strain could provide deeper insights into its ecological functions and potential applications in biotechnology or bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas deceptionensis
Strainstrain LMG 25555

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas deceptionensis strain LMG 25555
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas deceptionensis strain LMG 25555 genome assembly,

Gene Summary

Adenine Count

1056969 bp

Thymine Count

1057694 bp

Guanine Count

1491757 bp

Cytosine Count

1490342 bp

Genome Length

5096762 bp

Protein-coding Genes

4530 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidylate synthaseSAMN04489800_1063Not AvailablePositive1170597 - 117156836581.8
cd(ii)/pb(ii)-responsive transcriptional regulatorSAMN04489800_1064Not AvailableNegative1171661 - 117211016867.0
cd2+/zn2+-exporting atpaseSAMN04489800_1065Not AvailablePositive1172197 - 117447980469.5
aminoethylphosphonate catabolism associated lysr family transcriptional regulatorSAMN04489800_1066Not AvailablePositive1174496 - 117535931897.0
iron(iii) transport system atp-binding proteinSAMN04489800_1067Not AvailablePositive1175670 - 117674638784.7
iron(iii) transport system permease proteinSAMN04489800_1068Not AvailablePositive1176748 - 117847261954.3
iron(iii) transport system substrate-binding proteinSAMN04489800_1069Not AvailablePositive1178520 - 117954237347.5
fad dependent oxidoreductase tigr03364SAMN04489800_1070Not AvailablePositive1179683 - 118081641232.4
phosphonate degradation operons associated hdig domain proteinSAMN04489800_1071Not AvailablePositive1180816 - 118137320855.8
small gtp-binding protein domain-containing proteinSAMN04489800_1072Not AvailableNegative1181477 - 118284149742.8

Displaying genes 1151 – 1160 of 4704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm00347382-oxobutanoic acidC4H5O3Chemical structure of 2-oxobutanoic acidNULL
Average101.0807Da
Monoisotopic101.023869026Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.