Pseudomonas frederiksbergensis strain BS3655

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas frederiksbergensis strain BS3655 is characterized by a single replicon and is cataloged under the accession number FNTF00000000.1. This bacterium belongs to the Pseudomonas genus, which is known for its metabolic diversity and ability to thrive in various environments. Members of the Pseudomonas genus, including P. frederiksbergensis, are often studied for their potential in bioremediation and their role in nutrient cycling due to their versatile metabolic pathways. The presence of only one replicon suggests a streamlined genetic organization, which may contribute to the efficiency of its cellular processes. Such a trait can be advantageous in environments where rapid adaptation and resource utilization are necessary for survival. The ecological implications of Pseudomonas frederiksbergensis strain BS3655's traits may include its role in soil ecosystems, where it could interact with other microorganisms and contribute to the degradation of organic matter or pollutants, enhancing soil health and fertility. Overall, the limited genetic structure and classification of strain BS3655 highlight the potential ecological significance of Pseudomonas frederiksbergensis in various habitats, particularly in maintaining ecological balance and promoting biogeochemical cycles. Further research into its specific metabolic capabilities and ecological interactions would be valuable for understanding its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas frederiksbergensis
Strainstrain BS3655

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas frederiksbergensis strain BS3655
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas frederiksbergensis strain BS3655 genome assembly,

Gene Summary

Adenine Count

1315505 bp

Thymine Count

1310777 bp

Guanine Count

1881480 bp

Cytosine Count

1886574 bp

Genome Length

6394336 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

211 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN04490185_0334Not AvailablePositive317348 - 31798923809.2
uncharacterized conserved protein ycekSAMN04490185_0335Not AvailableNegative318120 - 3184049520.77
4-hydroxy-3-polyprenylbenzoate decarboxylaseSAMN04490185_0336Not AvailableNegative318397 - 31902922922.8
udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligaseSAMN04490185_0337Not AvailableNegative319026 - 32037548310.0
transcriptional regulator of acetoin/glycerol metabolismSAMN04490185_0338Not AvailableNegative320571 - 32248470172.1
aldehyde dehydrogenaseSAMN04490185_0339Not AvailablePositive322916 - 32443654820.9
ethanolamine permeaseSAMN04490185_0340Not AvailablePositive324553 - 32600150895.1
ethanolamine ammonia-lyase heavy chainSAMN04490185_0341Not AvailablePositive326053 - 32744750049.1
ethanolamine ammonia-lyase light chainSAMN04490185_0342Not AvailablePositive327444 - 32828030185.1
acetyltransferase (gnat) family proteinSAMN04490185_0343Not AvailablePositive328393 - 32885417787.4

Displaying genes 481 – 490 of 5810 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.