Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN04490193_0813 | Not Available | Positive | 831874 - 832551 | 25066.5 |
| lipoprotein nlpd | SAMN04490193_0814 | Not Available | Positive | 832759 - 833595 | 29260.0 |
| rna polymerase, sigma 38 subunit, rpos | SAMN04490193_0815 | Not Available | Positive | 833701 - 834705 | 38107.6 |
| cold-shock dna-binding protein family | SAMN04490193_0816 | Not Available | Negative | 834916 - 835125 | 7727.11 |
| dctp deaminase | SAMN04490193_0817 | Not Available | Positive | 835515 - 836081 | 21231.3 |
| hypothetical protein | SAMN04490193_0818 | Not Available | Positive | 836189 - 836389 | 7040.26 |
| metallophosphoesterase, dna ligase-associated | SAMN04490193_0819 | Not Available | Negative | 836405 - 837055 | 23905.8 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN04490193_0820 | Not Available | Negative | 837055 - 839535 | 91303.4 |
| amino acid abc transporter atp-binding protein, paat family | SAMN04490193_0821 | Not Available | Negative | 839593 - 840357 | 28156.2 |
| hypothetical protein | SAMN04490193_0822 | Not Available | Negative | 840371 - 841489 | 40183.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





