Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic chaperone for outer membrane proteins skp | SAMN04490193_0793 | Not Available | Positive | 810338 - 810841 | 18946.2 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN04490193_0794 | Not Available | Positive | 810845 - 811900 | 36177.4 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN04490193_0795 | Not Available | Positive | 812011 - 812451 | 16702.5 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN04490193_0796 | Not Available | Positive | 812448 - 813224 | 27991.6 |
| lipid-a-disaccharide synthase | SAMN04490193_0797 | Not Available | Positive | 813227 - 814366 | 41479.3 |
| rnase hii | SAMN04490193_0798 | Not Available | Positive | 814363 - 814995 | 22833.8 |
| dna polymerase iii, alpha subunit | SAMN04490193_0799 | Not Available | Positive | 815073 - 818594 | 131368.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN04490193_0800 | Not Available | Positive | 818723 - 819670 | 34876.1 |
| trna(ile)-lysidine synthase | SAMN04490193_0801 | Not Available | Positive | 819833 - 821143 | 48378.2 |
| ctp synthase | SAMN04490193_0802 | Not Available | Positive | 821418 - 823049 | 59703.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





