Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxylase, type 1 | SAMN04490193_0752 | Not Available | Positive | 763417 - 766062 | 97942.5 |
| adenylate kinase | SAMN04490193_0753 | Not Available | Positive | 766362 - 767009 | 23281.0 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04490193_0754 | Not Available | Positive | 767099 - 767785 | 24229.2 |
| hypothetical protein | SAMN04490193_0755 | Not Available | Positive | 767946 - 768236 | 10552.4 |
| uncharacterized conserved protein yece, duf72 family | SAMN04490193_0756 | Not Available | Positive | 768236 - 769096 | 32190.6 |
| 2-methylisocitrate lyase, pep mutase family | SAMN04490193_0757 | Not Available | Positive | 769124 - 769951 | 28960.5 |
| uncharacterized conserved protein | SAMN04490193_0758 | Not Available | Positive | 769955 - 770653 | 25634.5 |
| hypothetical protein | SAMN04490193_0759 | Not Available | Negative | 770650 - 771270 | 22565.8 |
| 16s rrna (guanine1516-n2)-methyltransferase | SAMN04490193_0760 | Not Available | Positive | 771367 - 772149 | 27874.9 |
| transcriptional regulator, tetr family | SAMN04490193_0761 | Not Available | Negative | 772229 - 772882 | 23817.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





