Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol monooxygenase ygin | SAMN04490193_0586 | Not Available | Negative | 604064 - 604348 | 11118.3 |
| glutamate synthase domain-containing protein 2 | SAMN04490193_0587 | Not Available | Negative | 604360 - 605979 | 59084.3 |
| beta-glucosidase | SAMN04490193_0588 | Not Available | Negative | 606061 - 608325 | 81286.8 |
| glucans biosynthesis protein | SAMN04490193_0589 | Not Available | Negative | 608322 - 609953 | 60395.4 |
| response regulator receiver domain-containing protein | SAMN04490193_0590 | Not Available | Negative | 610111 - 611490 | 51355.3 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04490193_0591 | Not Available | Negative | 611487 - 613301 | 67007.5 |
| cytochrome c peroxidase | SAMN04490193_0592 | Not Available | Negative | 613312 - 614280 | 35648.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_0593 | Not Available | Negative | 614306 - 616180 | 69894.7 |
| response regulator c-di-gmp phosphodiesterase, rpfg family, contains rec and hd-gyp domains | SAMN04490193_0594 | Not Available | Positive | 616400 - 617716 | 49006.3 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04490193_0595 | Not Available | Positive | 617749 - 618162 | 14648.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





