Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p pilus assembly protein, chaperone papd | SAMN04490193_0566 | Not Available | Positive | 573872 - 574633 | 27770.2 |
| pilin (type 1 fimbria component protein) | SAMN04490193_0567 | Not Available | Positive | 574656 - 575237 | 20745.6 |
| pilin (type 1 fimbria component protein) | SAMN04490193_0568 | Not Available | Positive | 575248 - 575742 | 17211.7 |
| pilin (type 1 fimbria component protein) | SAMN04490193_0569 | Not Available | Positive | 575756 - 576235 | 16929.4 |
| pilin (type 1 fimbria component protein) | SAMN04490193_0570 | Not Available | Positive | 576245 - 576793 | 19416.1 |
| fimbrial protein | SAMN04490193_0571 | Not Available | Positive | 576906 - 577862 | 33821.3 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN04490193_0572 | Not Available | Negative | 577866 - 578633 | 28334.0 |
| transcriptional regulator padr-like family protein | SAMN04490193_0573 | Not Available | Negative | 578630 - 579178 | 20220.0 |
| hypothetical protein | SAMN04490193_0574 | Not Available | Positive | 579703 - 580194 | 17117.1 |
| outer membrane usher protein fimd/papc | SAMN04490193_0575 | Not Available | Positive | 580320 - 582845 | 92075.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





