Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN04490193_0545 | Not Available | Positive | 544324 - 545655 | 47056.1 |
| polysaccharide deacetylase | SAMN04490193_0546 | Not Available | Positive | 545667 - 546545 | 33709.1 |
| major facilitator superfamily protein | SAMN04490193_0547 | Not Available | Positive | 546686 - 548026 | 47688.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04490193_0548 | Not Available | Positive | 548037 - 548798 | 26273.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04490193_0549 | Not Available | Positive | 548938 - 549687 | 25820.2 |
| hypothetical protein | SAMN04490193_0550 | Not Available | Positive | 549701 - 550003 | 11101.5 |
| gtpase, g3e family | SAMN04490193_0551 | Not Available | Positive | 550115 - 551089 | 35409.1 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04490193_0552 | Not Available | Positive | 551086 - 552258 | 44157.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_0553 | Not Available | Positive | 552472 - 554808 | 85921.0 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN04490193_0554 | Not Available | Positive | 554962 - 559194 | 153695.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





