Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valyl-trna synthetase | SAMN04490193_0525 | Not Available | Negative | 520443 - 523289 | 107094.0 |
| hypothetical protein | SAMN04490193_0526 | Not Available | Negative | 523439 - 523831 | 14373.1 |
| dna polymerase iii, chi subunit | SAMN04490193_0527 | Not Available | Negative | 523839 - 524267 | 16192.3 |
| aminopeptidase a. metallo peptidase. merops family m17 | SAMN04490193_0528 | Not Available | Negative | 524435 - 525925 | 52463.7 |
| lipopolysaccharide export system permease protein | SAMN04490193_0529 | Not Available | Positive | 526200 - 527318 | 41277.3 |
| lipopolysaccharide export system permease protein | SAMN04490193_0530 | Not Available | Positive | 527311 - 528390 | 39074.1 |
| gtp-binding protein lepa | SAMN04490193_0531 | Not Available | Positive | 528542 - 530341 | 66472.2 |
| signal peptidase i serine peptidase. merops family s26a | SAMN04490193_0532 | Not Available | Positive | 530347 - 531201 | 31895.9 |
| rnase iii | SAMN04490193_0533 | Not Available | Positive | 531349 - 532038 | 25386.5 |
| gtp-binding protein era | SAMN04490193_0534 | Not Available | Positive | 532031 - 532933 | 33941.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





