Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN04490193_0494 | Not Available | Positive | 488345 - 489280 | 33882.8 |
| iron complex outermembrane recepter protein | SAMN04490193_0495 | Not Available | Positive | 489390 - 491807 | 87140.7 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04490193_0496 | Not Available | Positive | 492104 - 493549 | 51223.9 |
| dna-binding transcriptional regulator, iclr family | SAMN04490193_0497 | Not Available | Negative | 493551 - 494330 | 27588.2 |
| homogentisate 1,2-dioxygenase | SAMN04490193_0498 | Not Available | Positive | 494451 - 495734 | 47225.3 |
| fumarylacetoacetate hydrolase | SAMN04490193_0499 | Not Available | Positive | 495738 - 497024 | 46449.2 |
| maleylacetoacetate isomerase | SAMN04490193_0500 | Not Available | Positive | 497037 - 497675 | 23336.0 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN04490193_0501 | Not Available | Positive | 497725 - 499095 | 48830.0 |
| regulator of sirc expression, contains transglutaminase-like and tpr domains | SAMN04490193_0502 | Not Available | Negative | 499268 - 500071 | 29896.5 |
| leucine dehydrogenase | SAMN04490193_0503 | Not Available | Positive | 500257 - 501276 | 35354.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





