Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase | SAMN04490193_6652 | Not Available | Negative | 7032284 - 7033315 | 37393.9 |
| oligoribonuclease | SAMN04490193_6653 | Not Available | Positive | 7033424 - 7033966 | 20489.3 |
| uncharacterized membrane protein yeih | SAMN04490193_6654 | Not Available | Positive | 7034142 - 7034756 | 22607.5 |
| epoxyqueuosine reductase | SAMN04490193_6655 | Not Available | Negative | 7034753 - 7035817 | 39764.5 |
| nad(p)h-hydrate epimerase | SAMN04490193_6656 | Not Available | Positive | 7035881 - 7036741 | 29337.7 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04490193_6657 | Not Available | Positive | 7036729 - 7037199 | 17060.6 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04490193_6658 | Not Available | Positive | 7037215 - 7038636 | 49940.9 |
| dna mismatch repair protein mutl | SAMN04490193_6659 | Not Available | Positive | 7038636 - 7040549 | 69954.5 |
| trna dimethylallyltransferase | SAMN04490193_6660 | Not Available | Positive | 7040549 - 7041520 | 35415.6 |
| rna-binding protein hfq | SAMN04490193_6661 | Not Available | Positive | 7041615 - 7041875 | 9324.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





