Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN04490193_6592 | Not Available | Negative | 6957334 - 6957981 | 23475.8 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_6593 | Not Available | Negative | 6958054 - 6960747 | 100761.0 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04490193_6594 | Not Available | Negative | 6961051 - 6962700 | 56240.0 |
| pyruvate dehydrogenase e1 component | SAMN04490193_6595 | Not Available | Negative | 6962712 - 6965357 | 99439.4 |
| glutamate-ammonia-ligase adenylyltransferase | SAMN04490193_6596 | Not Available | Positive | 6965741 - 6968680 | 109773.0 |
| heptosyltransferase-2 | SAMN04490193_6597 | Not Available | Positive | 6968735 - 6969769 | 38274.5 |
| heptosyltransferase-1 | SAMN04490193_6598 | Not Available | Positive | 6969771 - 6970832 | 39266.6 |
| udp-glucose:(heptosyl)lps alpha-1,3-glucosyltransferase | SAMN04490193_6599 | Not Available | Positive | 6970832 - 6971956 | 42207.9 |
| heptose i phosphotransferase | SAMN04490193_6600 | Not Available | Positive | 6971953 - 6972759 | 30430.2 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN04490193_6601 | Not Available | Positive | 6972759 - 6973493 | 28635.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





