Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapa, inhibits gtpase activity of ftsz | SAMN04490193_6582 | Not Available | Positive | 6942288 - 6942578 | 10540.9 |
| butyryl-coa dehydrogenase | SAMN04490193_6583 | Not Available | Negative | 6942575 - 6944377 | 66134.0 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04490193_6584 | Not Available | Negative | 6944530 - 6948483 | 142617.0 |
| sodium/proline symporter | SAMN04490193_6585 | Not Available | Positive | 6948944 - 6950428 | 53019.6 |
| hypothetical protein | SAMN04490193_6586 | Not Available | Negative | 6950525 - 6950914 | 14262.8 |
| hypothetical protein | SAMN04490193_6587 | Not Available | Negative | 6950904 - 6951851 | 33734.9 |
| type vi secretion system secreted protein vgrg | SAMN04490193_6588 | Not Available | Positive | 6952220 - 6954250 | 74678.2 |
| protein of unknown function | SAMN04490193_6589 | Not Available | Positive | 6954250 - 6954975 | 26267.2 |
| o-acetylhomoserine sulfhydrylase | SAMN04490193_6590 | Not Available | Negative | 6954961 - 6956238 | 45657.7 |
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN04490193_6591 | Not Available | Positive | 6956414 - 6957250 | 31733.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





