Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilo | SAMN04490193_6542 | Not Available | Positive | 6896607 - 6897578 | 35804.3 |
| type iv pilus assembly protein pilq | SAMN04490193_6543 | Not Available | Positive | 6897591 - 6898973 | 49658.9 |
| shikimate kinase | SAMN04490193_6544 | Not Available | Positive | 6899005 - 6899496 | 18350.3 |
| 3-dehydroquinate synthase | SAMN04490193_6545 | Not Available | Positive | 6899622 - 6900722 | 39766.1 |
| damx protein | SAMN04490193_6546 | Not Available | Positive | 6900733 - 6902277 | 53519.9 |
| glutamate synthase (nadph) large subunit | SAMN04490193_6547 | Not Available | Positive | 6902629 - 6907074 | 162087.0 |
| glutamate synthase (nadph) small subunit | SAMN04490193_6548 | Not Available | Positive | 6907107 - 6908525 | 51973.3 |
| uroporphyrinogen decarboxylase | SAMN04490193_6549 | Not Available | Positive | 6908769 - 6909836 | 38960.0 |
| cytochrome b561 | SAMN04490193_6550 | Not Available | Positive | 6910032 - 6910706 | 24535.7 |
| mfs transporter, ynfm family, putative membrane transport protein | SAMN04490193_6551 | Not Available | Negative | 6910553 - 6911821 | 44977.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





