Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein ecpd | SAMN04490193_6521 | Not Available | Negative | 6873851 - 6874618 | 28274.8 |
| chaperone protein ecpd | SAMN04490193_6522 | Not Available | Negative | 6874627 - 6875406 | 28446.3 |
| major type 1 subunit fimbrin (pilin) | SAMN04490193_6523 | Not Available | Negative | 6875493 - 6876074 | 19593.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04490193_6524 | Not Available | Positive | 6876445 - 6877107 | 24274.7 |
| dna-binding transcriptional regulator, acrr family | SAMN04490193_6525 | Not Available | Negative | 6877146 - 6877766 | 23443.8 |
| polyhydroxyalkanoate synthase | SAMN04490193_6526 | Not Available | Negative | 6877794 - 6879476 | 62769.6 |
| poly(3-hydroxyalkanoate) depolymerase | SAMN04490193_6527 | Not Available | Negative | 6879565 - 6880410 | 31298.6 |
| polyhydroxyalkanoate synthase | SAMN04490193_6528 | Not Available | Negative | 6880546 - 6882225 | 62406.5 |
| duf971 family protein | SAMN04490193_6529 | Not Available | Negative | 6882475 - 6882852 | 13897.7 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN04490193_6530 | Not Available | Negative | 6882932 - 6884269 | 49557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





