Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN04490193_6450 | Not Available | Positive | 6796394 - 6797131 | 25753.1 |
| imidazole glycerol phosphate synthase subunit hisf | SAMN04490193_6451 | Not Available | Positive | 6797141 - 6797911 | 27129.5 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490193_6452 | Not Available | Positive | 6797927 - 6798733 | 29988.2 |
| hypothetical protein | SAMN04490193_6453 | Not Available | Negative | 6798724 - 6799503 | 28183.4 |
| carboxyl-terminal processing protease | SAMN04490193_6454 | Not Available | Negative | 6799505 - 6800821 | 46383.6 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN04490193_6455 | Not Available | Negative | 6800852 - 6802147 | 47867.8 |
| phosphoglycerate mutase | SAMN04490193_6456 | Not Available | Negative | 6802333 - 6803859 | 54955.2 |
| rhodanese-related sulfurtransferase | SAMN04490193_6457 | Not Available | Positive | 6804011 - 6804424 | 14677.1 |
| glutaredoxin 3 | SAMN04490193_6458 | Not Available | Positive | 6804426 - 6804680 | 9223.3 |
| protein translocase subunit secb | SAMN04490193_6459 | Not Available | Positive | 6804723 - 6805202 | 17620.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





