Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | SAMN04490193_6395 | Not Available | Negative | 6734083 - 6735165 | 40196.5 |
| 4-aminobutyrate aminotransferase | SAMN04490193_6396 | Not Available | Positive | 6735319 - 6738219 | 106197.0 |
| agmatine deiminase | SAMN04490193_6397 | Not Available | Positive | 6738341 - 6739447 | 40507.6 |
| hypothetical protein | SAMN04490193_6398 | Not Available | Positive | 6739682 - 6739897 | 8186.72 |
| iron complex outermembrane recepter protein | SAMN04490193_6399 | Not Available | Negative | 6740096 - 6742183 | 76919.6 |
| outer membrane porin, oprd family | SAMN04490193_6400 | Not Available | Positive | 6742592 - 6743908 | 47365.0 |
| peptidase family m48 | SAMN04490193_6401 | Not Available | Negative | 6743982 - 6746111 | 77430.0 |
| protein of unknown function | SAMN04490193_6402 | Not Available | Negative | 6746316 - 6746600 | 10157.0 |
| iron complex outermembrane recepter protein | SAMN04490193_6404 | Not Available | Negative | 6747167 - 6749590 | 88474.5 |
| fecr family protein | SAMN04490193_6405 | Not Available | Negative | 6749689 - 6750651 | 35356.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





