Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm domain-containing protein | SAMN04490193_6385 | Not Available | Positive | 6725338 - 6725778 | 15559.7 |
| putative hydrolase of the had superfamily | SAMN04490193_6386 | Not Available | Negative | 6725886 - 6726548 | 25138.0 |
| adp-ribose diphosphatase | SAMN04490193_6387 | Not Available | Positive | 6726636 - 6727202 | 21130.2 |
| 3'(2'),5'-bisphosphate nucleotidase | SAMN04490193_6388 | Not Available | Positive | 6727199 - 6728035 | 29795.3 |
| thioesterase domain-containing protein, putative | SAMN04490193_6389 | Not Available | Negative | 6728101 - 6728556 | 17242.7 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN04490193_6390 | Not Available | Negative | 6728583 - 6729959 | 50164.4 |
| histidine kinase | SAMN04490193_6391 | Not Available | Negative | 6729956 - 6731764 | 66779.9 |
| dtdp-4-dehydrorhamnose reductase | SAMN04490193_6392 | Not Available | Negative | 6731801 - 6732670 | 31492.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04490193_6393 | Not Available | Negative | 6732667 - 6733212 | 20372.8 |
| glucose-1-phosphate thymidylyltransferase | SAMN04490193_6394 | Not Available | Negative | 6733193 - 6734086 | 33425.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





