Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, alpa family | SAMN04490193_6292 | Not Available | Negative | 6623852 - 6624106 | 9180.36 |
| hypothetical protein | SAMN04490193_6293 | Not Available | Negative | 6624189 - 6625133 | 35051.4 |
| integrase | SAMN04490193_6294 | Not Available | Negative | 6625380 - 6626615 | 46734.4 |
| Trna-arg | Not Available | Not Available | Positive | 6626783 - 6626859 | Not Available |
| glutarate-semialdehyde dehydrogenase | SAMN04490193_6296 | Not Available | Positive | 6627230 - 6628672 | 51587.3 |
| 5-aminovalerate transaminase | SAMN04490193_6298 | Not Available | Positive | 6628855 - 6630132 | 44809.4 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_6299 | Not Available | Negative | 6630527 - 6631528 | 36971.7 |
| fatty-acid desaturase | SAMN04490193_6300 | Not Available | Negative | 6631717 - 6632901 | 45363.2 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_6301 | Not Available | Positive | 6633068 - 6634978 | 71742.2 |
| hypothetical protein | SAMN04490193_6302 | Not Available | Positive | 6635217 - 6635399 | 6719.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





