Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair photolyase | SAMN04490193_6139 | Not Available | Positive | 6457034 - 6458092 | 39455.8 |
| carbonic anhydrase | SAMN04490193_6140 | Not Available | Positive | 6458319 - 6459050 | 26391.4 |
| sulfate permease, mfs superfamily | SAMN04490193_6141 | Not Available | Positive | 6459135 - 6460682 | 53939.9 |
| hypothetical protein | SAMN04490193_6142 | Not Available | Negative | 6460751 - 6461398 | 23804.2 |
| cytochrome c oxidase subunit 2 | SAMN04490193_6143 | Not Available | Positive | 6461767 - 6462894 | 41744.4 |
| cytochrome c oxidase subunit 1 | SAMN04490193_6144 | Not Available | Positive | 6462953 - 6464542 | 58631.9 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN04490193_6145 | Not Available | Positive | 6464564 - 6465115 | 20406.0 |
| cytochrome c oxidase subunit 3 | SAMN04490193_6146 | Not Available | Positive | 6465151 - 6466038 | 33241.9 |
| protein of unknown function | SAMN04490193_6147 | Not Available | Negative | 6466045 - 6466248 | 7189.1 |
| cytochrome oxidase assembly protein shyy1 | SAMN04490193_6148 | Not Available | Positive | 6466294 - 6467058 | 28513.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





